SOM cluster: 2354

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 314
Promoter: 1%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.000000008
Factore-val(match)DB
Foxq10.000022153JASPAR
Lhx30.00068309JASPAR
ARID3A0.0029158JASPAR
NKX3-10.012429JASPAR
Pdx10.016493JASPAR
Sites: 25/100 | e-val: 0.00067
Factore-val(match)DB
AP10.00014923JASPAR
NFE2L20.0012341JASPAR
Evi10.0015777JASPAR
NFE2L1::MafG0.023646JASPAR
NR4A20.030776JASPAR

BED file downloads

Download top of 314 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 98750880-98751030FARP133.08
chr9: 137483465-137483615COL5A142.99
chr20: 4805065-4805215PRNT48.38
chr8: 70401460-70401610SULF153.44
chr19: 34619900-34620050LSM14A54.46
chr2: 218575165-218575315AC009469.159.05
chr5: 134707800-134707950CTB-138E5.159.3
chr4: 40914620-40914770RNA5SP16061.76
chr11: 119316700-119316850THY163.73
chr8: 23188380-23188530LOXL263.81
View top connections.

Other

CodePlot