SOM cluster: 236

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 124
Promoter: 48%
CpG-Island: 64%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 86/100 | e-val: 0
Factore-val(match)DB
SP10.00000012317JASPAR
TFAP2A0.00075097JASPAR
Egr10.0056865JASPAR
PLAG10.0091812JASPAR
Pax40.017912JASPAR
Sites: 24/100 | e-val: 0.00000000063
Factore-val(match)DB
SP10.0000031723JASPAR
Klf40.0004128JASPAR
RREB10.00079001JASPAR
MZF1_1-40.0017978JASPAR
Pax40.002966JASPAR
Sites: 21/100 | e-val: 0.00017
Factore-val(match)DB
EWSR1-FLI10.000006252JASPAR
Pax40.000065857JASPAR
SP10.000075194JASPAR
SPIB0.00097496JASPAR
Tal1::Gata10.0010324JASPAR

BED file downloads

Download top of 124 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 182584220-182584370RNASEL46.89
chr1: 182584220-182584370RP11-317P15.346.89
chr8: 38796040-38796190CTD-2544N14.352.07
chr8: 38796040-38796190PLEKHA252.07
chr19: 11314460-11314610SPC2454.17
chr19: 11314460-11314610KANK254.17
chr18: 46067740-46067890CTIF62.08
chr10: 99474400-99474550SFRP569.69
chr11: 68778560-68778710RP11-554A11.670.08
chr11: 68778560-68778710MRGPRF70.08
View top connections.

Other

CodePlot