SOM cluster: 2370

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 205
Promoter: 3%
CpG-Island: 0%
Conserved: 76%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 72/100 | e-val: 0
Factore-val(match)DB
ARID3A0.0000051345JASPAR
TAL1::TCF30.000021366JASPAR
Prrx20.000083848JASPAR
Pdx10.00078907JASPAR
Nobox0.00227JASPAR

BED file downloads

Download top of 205 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 93021280-93021430RUNX1T153.52
chr1: 71773260-71773410RP11-386O9.253.56
chr1: 71773260-71773410NEGR153.56
chr5: 67548080-67548230PIK3R164.95
chr6: 112470960-112471110TUBE165.48
chr6: 112470960-112471110FAM229B65.48
chr17: 31285540-31285690AC084809.368.21
chr17: 31285540-31285690TMEM9868.21
chr9: 16681480-16681630BNC268.22
chr5: 125825960-125826110GRAMD369.52
View top connections.

Other

CodePlot