SOM cluster: 2391

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 210
Promoter: 8%
CpG-Island: 2%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 26/100 | e-val: 0.00000018
Factore-val(match)DB
TLX1::NFIC0.0000000049293JASPAR
HNF4A0.0005617JASPAR
T0.012249JASPAR
NFIC0.013703JASPAR
INSM10.01404JASPAR
Sites: 23/100 | e-val: 0.011
Factore-val(match)DB
REST0.0037673JASPAR
SP10.0058868JASPAR
RXR::RAR_DR50.018027JASPAR
EWSR1-FLI10.019391JASPAR
Zfx0.038863JASPAR

BED file downloads

Download top of 210 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 13043500-13043650HEBP139.91
chr12: 13043500-13043650GPRC5A39.91
chr12: 13043500-13043650RP11-392P7.639.91
chr1: 149950620-149950770SV2A39.91
chr9: 130753480-130753630SLC25A2542.64
chr9: 130753480-130753630FAM102A42.64
chr8: 8127980-8128130SGK22348.46
chr1: 179845480-179845630RP11-12M5.349.81
chr1: 179845480-179845630IFRG1549.81
chr1: 179845480-179845630FAM163A49.81
View top connections.

Other

CodePlot