SOM cluster: 2393

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 139
Promoter: 14%
CpG-Island: 17%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 73/100 | e-val: 7.5e-31
Factore-val(match)DB
SP10.0000066589JASPAR
Klf40.0000090417JASPAR
Egr10.0016428JASPAR
RREB10.010703JASPAR
TFAP2A0.034003JASPAR
Sites: 55/100 | e-val: 0.000006
Factore-val(match)DB
PPARG::RXRA0.000029484JASPAR
HNF4A0.00039909JASPAR
SP10.0011578JASPAR
NR2F10.0016046JASPAR
TFAP2A0.0038199JASPAR
Sites: 23/100 | e-val: 1.1
Factore-val(match)DB
SP10.00020557JASPAR
RXR::RAR_DR50.0037963JASPAR
Myf0.0042127JASPAR
MZF1_1-40.0042615JASPAR
EWSR1-FLI10.0064624JASPAR

BED file downloads

Download top of 139 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150954580-150954730CERS213.02
chr1: 150954580-150954730RP11-316M1.1213.02
chr1: 150954580-150954730PRUNE13.02
chr1: 150954580-150954730ANXA913.02
chr3: 183959700-183959850ECE250.11
chr3: 183959700-183959850VWA5B250.11
chr19: 36336585-36336735HCST51.81
chr3: 128207340-128207490GATA254.96
chr3: 128207340-128207490RP11-475N22.454.96
chr9: 127557300-127557450RPL3555.37
View top connections.

Other

CodePlot