SOM cluster: 24

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 201
Promoter: 18%
CpG-Island: 3%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 6.1e-16
Factore-val(match)DB
SPI10.0000000053997JASPAR
FEV0.000000008653JASPAR
GABPA0.00000050577JASPAR
ELF50.0000021429JASPAR
ELK40.0000025346JASPAR
Sites: 45/100 | e-val: 0.000000000022
Factore-val(match)DB
RUNX10.00000000021571JASPAR
RREB10.00036652JASPAR
ZNF354C0.0027696JASPAR
Tcfcp2l10.0064129JASPAR
IRF20.012997JASPAR
Sites: 30/100 | e-val: 0.000004
Factore-val(match)DB
RREB10.0000000037711JASPAR
SP10.00000032163JASPAR
Klf40.0000013364JASPAR
Pax40.0000086867JASPAR
Egr10.0015951JASPAR

BED file downloads

Download top of 201 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 160765820-160765970CD24436.35
chr1: 160765820-160765970LY936.35
chr1: 160765820-160765970SLAMF736.35
chr1: 160765820-160765970CD4836.35
chr1: 26616320-26616470CEP8538.72
chr1: 26616320-26616470CD5238.72
chr9: 134132040-134132190FAM78A43.85
chr9: 134132040-134132190PPAPDC343.85
chr12: 4252180-4252330RP11-320N7.144.56
chr2: 68954240-68954390ARHGAP2545.94
View top connections.

Other

CodePlot