SOM cluster: 2429

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 352
Promoter: 15%
CpG-Island: 1%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 14/100 | e-val: 0.027
Factore-val(match)DB
Foxd30.0000000000016233JASPAR
FOXI10.0000000084297JASPAR
FOXA10.0000010554JASPAR
Foxq10.0000061196JASPAR
Foxa20.00016589JASPAR

BED file downloads

Download top of 352 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 169078180-169078330ATP1B141.59
chr16: 89522985-89523135SPG743.43
chr17: 17745185-17745335SREBF148.74
chr3: 183723720-183723870ABCC550.56
chr3: 183723720-183723870ABCC5-AS150.56
chr17: 62159980-62160130TEX254.23
chr20: 32235800-32235950PXMP456.16
chr20: 32235800-32235950NECAB356.16
chr20: 32235800-32235950CBFA2T256.16
chr11: 108007040-108007190Y_RNA59.14
View top connections.

Other

CodePlot