SOM cluster: 2436

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 223
Promoter: 2%
CpG-Island: 0%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 62/100 | e-val: 5.9e-38
Factore-val(match)DB
FOXA10.00000000020526JASPAR
Foxa20.00000000038602JASPAR
Foxd30.00000082427JASPAR
HNF1B0.0000022496JASPAR
FOXO30.0000037256JASPAR
Sites: 19/100 | e-val: 0.0013
Factore-val(match)DB
Foxd30.00000000058356JASPAR
FOXA10.0000000013001JASPAR
FOXI10.000000065998JASPAR
Foxa20.0000019323JASPAR
FOXF20.000043789JASPAR

BED file downloads

Download top of 223 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147084320-147084470RN7SL261P14.49
chr9: 130675240-130675390ENG51.28
chr9: 130675240-130675390FAM102A51.28
chr9: 130675240-130675390RP11-228B15.451.28
chr3: 133461600-133461750TF69.98
chr3: 133461600-133461750SRPRB69.98
chr20: 52480900-52481050BCAS170.03
chr19: 54367800-54367950AC008440.1071.06
chr1: 15611600-15611750FHAD172.93
chr17: 70148025-70148175SOX973.89
View top connections.

Other

CodePlot