SOM cluster: 2437

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3205
Promoter: 1%
CpG-Island: 0%
Conserved: 24%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 8.3e-26
Factore-val(match)DB
NFATC20.00015333JASPAR
FOXO30.003911JASPAR
Pou5f10.010023JASPAR
Sox20.034385JASPAR
FEV0.040291JASPAR
Sites: 29/100 | e-val: 0.35
Factore-val(match)DB
HNF1B0.0000030039JASPAR
Foxd30.000089187JASPAR
HNF1A0.00010819JASPAR
Foxa20.00013002JASPAR
MEF2A0.00016282JASPAR

BED file downloads

Download top of 3205 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149689460-149689610HIST2H2BF13.02
chr1: 149689460-149689610RP11-196G18.313.02
chr1: 150878940-150879090ANXA932.35
chr7: 106731060-106731210PRKAR2B39.76
chr8: 120156360-120156510MAL240
chr8: 120156360-120156510RP11-4K16.240
chr3: 62231940-62232090C3orf1443.95
chr4: 77532820-77532970SHROOM346.29
chr4: 77532820-77532970AC107072.246.29
chr11: 100904900-100905050PGR49.46
View top connections.

Other

CodePlot