SOM cluster: 2450

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 207
Promoter: 5%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.8e-18
Factore-val(match)DB
AP10.000000000018556JASPAR
NFE2L20.0000000064691JASPAR
PPARG0.0032579JASPAR
NFE2L1::MafG0.0052387JASPAR
Foxa20.013099JASPAR
Sites: 30/100 | e-val: 0.00047
Factore-val(match)DB
TEAD10.00000023904JASPAR
REL0.000024831JASPAR
NF-kappaB0.000033606JASPAR
RELA0.00013967JASPAR
FEV0.00026062JASPAR
Sites: 25/100 | e-val: 0.0054
Factore-val(match)DB
SP10.000000001978JASPAR
Pax40.0000000080574JASPAR
EWSR1-FLI10.0001943JASPAR
RXR::RAR_DR50.00021227JASPAR
MZF1_5-130.00051451JASPAR

BED file downloads

Download top of 207 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 129513840-129513990TMCC126.83
chr1: 200628480-200628630CAMSAP247.45
chr6: 7505805-7505955DSP48.04
chr17: 8954160-8954310NTN154.73
chr5: 133846840-133846990RP11-215P8.454.74
chr5: 133846840-133846990AC005355.254.74
chr13: 78096220-78096370SCEL56.89
chr6: 26269280-26269430HIST1H3E59.8
chr6: 26269280-26269430HIST1H2APS459.8
chr6: 26269280-26269430HIST1H3G59.8
View top connections.

Other

CodePlot