SOM cluster: 2452

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 154
Promoter: 1%
CpG-Island: 1%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 54/100 | e-val: 5.3e-26
Factore-val(match)DB
AP10.000000000012514JASPAR
NFE2L20.0000000088455JASPAR
PPARG0.0028931JASPAR
NFE2L1::MafG0.006328JASPAR
Foxa20.012678JASPAR
Sites: 30/100 | e-val: 0.00016
Factore-val(match)DB
NFATC20.00041628JASPAR
FEV0.0019036JASPAR
EWSR1-FLI10.0022595JASPAR
FOXF20.0049139JASPAR
SPI10.0049764JASPAR

BED file downloads

Download top of 154 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145550160-145550310RNF11531.98
chr1: 145550160-145550310ITGA1031.98
chr1: 145550160-145550310RP11-315I20.331.98
chr1: 145550160-145550310PEX11B31.98
chr1: 145550160-145550310LIX1L31.98
chr1: 145550160-145550310PIAS331.98
chr1: 145550160-145550310ANKRD3531.98
chr1: 145550160-145550310RBM8A31.98
chr1: 145550160-145550310RP11-315I20.131.98
chr14: 55179160-55179310SAMD4A50.49
View top connections.

Other

CodePlot