SOM cluster: 2459

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 182
Promoter: 5%
CpG-Island: 2%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.7e-33
Factore-val(match)DB
HNF1A0JASPAR
HNF1B0.0000000000000012212JASPAR
Lhx30.00010501JASPAR
NR1H2::RXRA0.00060362JASPAR
ARID3A0.0012716JASPAR

BED file downloads

Download top of 182 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 1063900-1064050MIR200A43.12
chr6: 41006920-41007070UNC5CL44.07
chr6: 41006920-41007070ADCY10P144.07
chr1: 178003940-178004090RP11-568K15.151.29
chr22: 30968785-30968935GAL3ST167.15
chr22: 30968785-30968935SEC14L667.15
chr11: 64881345-64881495SYVN167.8
chr22: 44219620-44219770EFCAB667.89
chr9: 116226360-116226510RGS368.19
chr9: 116226360-116226510HDHD368.19
View top connections.

Other

CodePlot