SOM cluster: 2462

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 263
Promoter: 7%
CpG-Island: 0%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 0
Factore-val(match)DB
HNF1B0.000000000019327JASPAR
HNF1A0.00000000013538JASPAR
Lhx30.0005526JASPAR
ARID3A0.0016163JASPAR
Prrx20.0062321JASPAR

BED file downloads

Download top of 263 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 115494380-115494530SNX3049.06
chr14: 32475560-32475710ARHGAP5-AS152.6
chr14: 32475560-32475710ARHGAP552.6
chr14: 32475560-32475710RP11-187E13.152.6
chr12: 6989880-6990030USP555.78
chr12: 6989880-6990030RPL13P555.78
chr12: 6989880-6990030DSTNP255.78
chr12: 6989880-6990030LRRC2355.78
chr1: 93741200-93741350TMED558.86
chr4: 40420480-40420630RBM4759.27
View top connections.

Other

CodePlot