SOM cluster: 2466

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 254
Promoter: 31%
CpG-Island: 36%
Conserved: 70%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0
Factore-val(match)DB
SP10.00000000015021JASPAR
EWSR1-FLI10.00013852JASPAR
Pax40.0005744JASPAR
PLAG10.00074795JASPAR
PPARG::RXRA0.0040055JASPAR
Sites: 15/100 | e-val: 0.0000000000091
Factore-val(match)DB
REST0JASPAR
MYC::MAX0.0077981JASPAR
RXR::RAR_DR50.015584JASPAR
TLX1::NFIC0.025843JASPAR
MAX0.026024JASPAR

BED file downloads

Download top of 254 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150522100-150522250ADAMTSL429.16
chr3: 129330780-129330930PLXND139.32
chr10: 20105000-20105150PLXDC250.32
chr11: 112832000-112832150NCAM152.29
chr11: 112832000-112832150RP11-629G13.152.29
chr1: 229566620-229566770ACTA156.41
chr6: 22146420-22146570RN7SKP24058.37
chr22: 31536480-31536630PLA2G358.99
chr1: 201583425-201583575RP11-134G8.659.55
chr3: 50194680-50194830SEMA3F61.92
View top connections.

Other

CodePlot