SOM cluster: 2476

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 269
Promoter: 1%
CpG-Island: 0%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.0000035
Factore-val(match)DB
MEF2A0.000053038JASPAR
Foxd30.0030518JASPAR
HNF1B0.0050313JASPAR
NKX3-10.0051917JASPAR
Lhx30.011428JASPAR
Sites: 29/100 | e-val: 2.5
Factore-val(match)DB
Pou5f10.000080788JASPAR
Foxq10.0040186JASPAR
Foxd30.0041732JASPAR
Sox20.007795JASPAR
FOXO30.0087876JASPAR

BED file downloads

Download top of 269 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 71254780-71254930NCOA260.93
chr8: 12652860-12653010LONRF163.7
chr6: 107743020-107743170PDSS267.33
chr18: 55454420-55454570RSL24D1P1169.06
chr5: 107460400-107460550FBXL1771.69
chr7: 127706000-127706150LRRC475.84
chr17: 46806820-46806970PRAC277.49
chr3: 183726080-183726230ABCC582.33
chr3: 183726080-183726230ABCC5-AS182.33
chr17: 35463100-35463250RP11-19G24.183.93
View top connections.

Other

CodePlot