SOM cluster: 2485

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 147
Promoter: 11%
CpG-Island: 5%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 4.4e-29
Factore-val(match)DB
TLX1::NFIC0.0000000050021JASPAR
INSM10.0006213JASPAR
Hand1::Tcfe2a0.020434JASPAR
NFIC0.027875JASPAR
ESR20.028143JASPAR
Sites: 38/100 | e-val: 0.000000066
Factore-val(match)DB
ESR10.013258JASPAR
FEV0.017222JASPAR
TP530.020733JASPAR
Stat30.026648JASPAR
INSM10.027142JASPAR

BED file downloads

Download top of 147 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 154547205-154547355TDRD1049.31
chr1: 154547205-154547355SHE49.31
chr11: 67350220-67350370NDUFV155.83
chr9: 85676960-85677110RASEF56.24
chr17: 40125040-40125190TTC2556.31
chr17: 61509980-61510130AC015923.164.3
chr17: 61509980-61510130CYB56164.3
chr1: 204099460-204099610PLEKHA664.69
chr1: 204099460-204099610GOLT1A64.69
chr1: 204099460-204099610ETNK264.69
View top connections.

Other

CodePlot