SOM cluster: 2490

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 187
Promoter: 10%
CpG-Island: 6%
Conserved: 31%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 18/100 | e-val: 2.5
Factore-val(match)DB
EWSR1-FLI10.000000013594JASPAR
SPI10.0000071076JASPAR
Pax40.000053549JASPAR
SP10.00019286JASPAR
NFATC20.00020594JASPAR

BED file downloads

Download top of 187 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 39166860-39167010WDR4843.37
chr3: 39166860-39167010XIRP143.37
chr17: 60004560-60004710MED1347.68
chr17: 60004560-60004710BRIP147.68
chr17: 60004560-60004710INTS247.68
chr8: 127571000-127571150FAM84B51.73
chr20: 46924885-46925035LINC0049452.99
chr8: 102064185-102064335RP11-302J23.153.21
chr8: 102064185-102064335RN7SKP24953.21
chr17: 64896445-64896595CACNG455.47
View top connections.

Other

CodePlot