SOM cluster: 270

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 163
Promoter: 31%
CpG-Island: 12%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 68/100 | e-val: 0
Factore-val(match)DB
SPIB0.0000002106JASPAR
SPI10.000016083JASPAR
IRF10.0037881JASPAR
FEV0.003946JASPAR
Stat30.0041777JASPAR

BED file downloads

Download top of 163 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149856520-149856670MTMR1120.79
chr1: 149856520-149856670HIST2H2AB20.79
chr1: 149856520-149856670HIST2H2BE20.79
chr1: 161708500-161708650FCRLB37.8
chr12: 49412880-49413030PRKAG141.42
chr17: 76745025-76745175RNU6-638P48.02
chr17: 76745025-76745175CYTH148.02
chr19: 51942300-51942450SIGLEC653.62
chr19: 51942300-51942450SIGLEC1053.62
chr19: 51942300-51942450LIM253.62
View top connections.

Other

CodePlot