SOM cluster: 275

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 200
Promoter: 9%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 68/100 | e-val: 0
Factore-val(match)DB
SPI10.000000047908JASPAR
SPIB0.00000055097JASPAR
IRF10.0000090395JASPAR
FEV0.0001976JASPAR
GABPA0.00069809JASPAR
Sites: 11/100 | e-val: 0.0037
Factore-val(match)DB
TAL1::TCF30.00057738JASPAR
ELK40.00072397JASPAR
IRF10.0018742JASPAR
Myf0.0025342JASPAR
SPI10.003475JASPAR

BED file downloads

Download top of 200 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149969640-149969790MTMR1113.02
chr15: 101481140-101481290ALDH1A344.61
chr15: 101481140-101481290RP11-66B24.444.61
chr15: 101481140-101481290LRRK144.61
chr8: 37731400-37731550RAB11FIP152.71
chr8: 37731400-37731550GPR12452.71
chr7: 97767200-97767350BHLHA1553.89
chr5: 149060420-149060570ARHGEF3753.93
chr19: 7538000-7538150ZNF35854.66
chr19: 7538000-7538150MCOLN154.66
View top connections.

Other

CodePlot