SOM cluster: 280

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 216
Promoter: 46%
CpG-Island: 79%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 2.94273e-44
Factore-val(match)DB
SP10.00000047056JASPAR
TFAP2A0.012132JASPAR
PLAG10.020606JASPAR
Klf40.023099JASPAR
Egr10.033337JASPAR
Sites: 57/100 | e-val: 0.000026
Factore-val(match)DB
TFAP2A0.00027944JASPAR
TP530.0074055JASPAR
Klf40.010276JASPAR
SP10.012547JASPAR
INSM10.031484JASPAR

BED file downloads

Download top of 216 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 13048905-13049055DNASE243.95
chr19: 13048905-13049055AD000092.343.95
chr19: 13048905-13049055FARSA43.95
chr19: 13048905-13049055RAD23A43.95
chr19: 13048905-13049055GCDH43.95
chr19: 13048905-13049055GADD45GIP143.95
chr1: 161067765-161067915NIT148.72
chr1: 161067765-161067915ADAMTS448.72
chr11: 65337180-65337330LTBP351.39
chr11: 65337180-65337330EHBP1L151.39
View top connections.

Other

CodePlot