SOM cluster: 281

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 207
Promoter: 13%
CpG-Island: 9%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 72/100 | e-val: 0
Factore-val(match)DB
SP10.0000000086212JASPAR
Pax40.0000091821JASPAR
RREB10.000023623JASPAR
Tal1::Gata10.002794JASPAR
Klf40.0032895JASPAR
Sites: 88/100 | e-val: 7e-26
Factore-val(match)DB
SP10.000000036466JASPAR
EWSR1-FLI10.000016757JASPAR
SPI10.00028181JASPAR
SPIB0.0011122JASPAR
TEAD10.0016544JASPAR
Sites: 41/100 | e-val: 0.000000049
Factore-val(match)DB
SP10.000344JASPAR
REST0.00048785JASPAR
REL0.0032141JASPAR
Tal1::Gata10.0033768JASPAR
NF-kappaB0.0036795JASPAR
Sites: 20/100 | e-val: 0.48
Factore-val(match)DB
IRF10.0000045227JASPAR
SPI10.0000061325JASPAR
IRF20.000021847JASPAR
GABPA0.00045434JASPAR
Pax40.001316JASPAR

BED file downloads

Download top of 207 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr20: 61585925-61586075SLC17A940.09
chr20: 61585925-61586075LINC0105640.09
chr20: 61585925-61586075DIDO140.09
chr8: 142105580-142105730DENND349.31
chr8: 142105580-142105730PTK249.31
chr11: 65407700-65407850LTBP350.26
chr11: 65407700-65407850EHBP1L150.26
chr11: 65407700-65407850FAM89B50.26
chr11: 65407700-65407850SIPA150.26
chr9: 130540960-130541110RP11-203J24.955.12
View top connections.

Other

CodePlot