SOM cluster: 299

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 129
Promoter: 9%
CpG-Island: 5%
Conserved: 77%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 27/100 | e-val: 0.000014
Factore-val(match)DB
SPIB0.0000012432JASPAR
SP10.0000041961JASPAR
SPI10.000059956JASPAR
EWSR1-FLI10.000062298JASPAR
Pax40.00016045JASPAR
Sites: 21/100 | e-val: 0.0058
Factore-val(match)DB
AP10.000000000025742JASPAR
NFE2L20.0000000068398JASPAR
PPARG0.0025385JASPAR
NFE2L1::MafG0.0047519JASPAR
RORA_20.013255JASPAR
Sites: 23/100 | e-val: 1
Factore-val(match)DB
RREB10.000030161JASPAR
SP10.000092701JASPAR
Pax40.00024085JASPAR
INSM10.00056413JASPAR
Tal1::Gata10.0015257JASPAR
Sites: 15/100 | e-val: 2.5
Factore-val(match)DB
RUNX10.00000040034JASPAR
FOXO30.0034902JASPAR
ZNF354C0.0040556JASPAR
FOXD10.0080116JASPAR
IRF10.021666JASPAR

BED file downloads

Download top of 129 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 8088920-8089070SLC2A1433.3
chr12: 8088920-8089070SLC2A333.3
chr1: 151030300-151030450PRUNE47.27
chr1: 151030300-151030450BNIPL47.27
chr1: 151030300-151030450SETDB147.27
chr1: 151030300-151030450RP11-316M1.1247.27
chr1: 151030300-151030450ANXA947.27
chr1: 151030300-151030450CERS247.27
chr3: 47308300-47308450KIF9-AS147.61
chr16: 87498400-87498550MAP1LC3B50.49
View top connections.

Other

CodePlot