SOM cluster: 311

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1472
Promoter: 7%
CpG-Island: 7%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 9.52883e-44
Factore-val(match)DB
SP10.00000012559JASPAR
Pax40.00012521JASPAR
EWSR1-FLI10.00019233JASPAR
PLAG10.00053495JASPAR
MZF1_5-130.0021125JASPAR

BED file downloads

Download top of 1472 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151101400-151101550PIP5K1A24.27
chr1: 151101400-151101550VPS7224.27
chr5: 150554245-150554395TNIP139.54
chrX: 47674380-47674530WASF4P41.59
chr11: 63551465-63551615C11orf8443.14
chr11: 63551465-63551615C11orf9543.14
chr1: 203185720-203185870NPM1P4045.74
chr3: 148915540-148915690HPS347.3
chr2: 235920405-235920555AC010148.148.57
chr2: 97577780-97577930ANKRD2349.72
View top connections.

Other

CodePlot