SOM cluster: 32

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 257
Promoter: 64%
CpG-Island: 91%
Conserved: 90%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.000052999JASPAR
Egr10.002009JASPAR
Klf40.0057652JASPAR
TFAP2A0.0061196JASPAR
NHLH10.016683JASPAR
Sites: 77/100 | e-val: 3.19496e-43
Factore-val(match)DB
SP10.0000019348JASPAR
TFAP2A0.00068628JASPAR
Klf40.0056055JASPAR
PLAG10.0057405JASPAR
Zfx0.019208JASPAR

BED file downloads

Download top of 257 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 138720760-138720910ZC3HAV1L37.43
chr1: 234614460-234614610TARBP153.15
chr3: 179370680-179370830USP1355.34
chr1: 90098440-90098590RP5-1007M22.257.05
chr4: 40058400-40058550N4BP258.8
chr4: 40058400-40058550SNORA5158.8
chr3: 32509380-32509530CMTM762.11
chr16: 75600120-75600270TMEM23162.65
chr22: 42196420-42196570CCDC13464.23
chr11: 124670260-124670410RP11-677M14.366.09
View top connections.

Other

CodePlot