SOM cluster: 330

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 163
Promoter: 13%
CpG-Island: 3%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 1e-27
Factore-val(match)DB
SPI10.00000009314JASPAR
IRF10.00000038701JASPAR
SPIB0.0000022296JASPAR
FEV0.000013684JASPAR
IRF20.000068888JASPAR
Sites: 24/100 | e-val: 0.00012
Factore-val(match)DB
SP10.00017467JASPAR
EWSR1-FLI10.0010229JASPAR
Tal1::Gata10.001321JASPAR
MZF1_1-40.0022905JASPAR
Pax40.0066621JASPAR

BED file downloads

Download top of 163 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 14495120-14495270DDX39A48.23
chr19: 14495120-14495270CD9748.23
chr19: 14495120-14495270GIPC148.23
chr11: 111809640-111809790RP11-708L7.652.07
chr11: 111809640-111809790FDXACB152.07
chr11: 111809640-111809790C11orf5252.07
chr11: 111809640-111809790HSPB2-C11orf5252.07
chr4: 102711780-102711930BANK152.71
chr1: 207999440-207999590C1orf13257.25
chr15: 90574680-90574830ZNF71057.96
View top connections.

Other

CodePlot