SOM cluster: 335

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 158
Promoter: 36%
CpG-Island: 67%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.0000000016758JASPAR
Egr10.00035628JASPAR
Klf40.0044234JASPAR
TFAP2A0.010282JASPAR
PLAG10.010681JASPAR
Sites: 55/100 | e-val: 0.0000000000000051
Factore-val(match)DB
SP10.000021483JASPAR
PLAG10.00096249JASPAR
TFAP2A0.01024JASPAR
CTCF0.012416JASPAR
Klf40.015933JASPAR

BED file downloads

Download top of 158 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150899040-150899190FAM63A16.15
chr1: 150899040-150899190ARNT16.15
chr1: 150899040-150899190PRUNE16.15
chr1: 150899040-150899190SETDB116.15
chr1: 149871200-149871350BOLA118.38
chr1: 149871200-149871350HIST2H2AB18.38
chr1: 150848620-150848770CTSK21.5
chr1: 150848620-150848770RP11-316M1.321.5
chrX: 112084100-112084250AMOT48.52
chr1: 150038980-150039130VPS4548.71
View top connections.

Other

CodePlot