SOM cluster: 339

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 85
Promoter: 9%
CpG-Island: 18%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/85 | e-val: 0
Factore-val(match)DB
SP10.0000000048374JASPAR
Klf40.000000027987JASPAR
PLAG10.00000073069JASPAR
RREB10.000048993JASPAR
INSM10.0003054JASPAR
Sites: 55/85 | e-val: 0
Factore-val(match)DB
Klf40.000000000026596JASPAR
SP10.0000000063788JASPAR
Zfx0.00014072JASPAR
Egr10.00026375JASPAR
TFAP2A0.024742JASPAR
Sites: 49/85 | e-val: 2e-20
Factore-val(match)DB
Klf40.00000000015428JASPAR
SP10.0000000012178JASPAR
Egr10.0010678JASPAR
Zfx0.0055318JASPAR
TLX1::NFIC0.011133JASPAR
Sites: 7/85 | e-val: 0.0000000000059
Factore-val(match)DB
Klf40.0028562JASPAR
RREB10.0055157JASPAR
FEV0.011778JASPAR
NFATC20.012378JASPAR
SP10.015167JASPAR
Sites: 7/85 | e-val: 0.000000000048
Factore-val(match)DB
EBF10.00010002JASPAR
Klf40.00070251JASPAR
RREB10.00079103JASPAR
SP10.0012269JASPAR
FEV0.0015715JASPAR
Sites: 14/85 | e-val: 0.042
Factore-val(match)DB
SP10.00093373JASPAR
Pax40.0010518JASPAR
RREB10.0055941JASPAR
RXR::RAR_DR50.0069349JASPAR
Klf40.0084153JASPAR

BED file downloads

Download top of 85 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 8119120-8119270ABLIM254.57
chr17: 48046420-48046570ITGA356.15
chr19: 703820-703970FSTL360.15
chr19: 703820-703970RNF12660.15
chr19: 703820-703970PTBP160.15
chr5: 179238300-179238450MAML162.91
chr19: 35557820-35557970SCN1B64.45
chr19: 3285185-3285335NFIC64.88
chr19: 19652060-19652210YJEFN366.63
chr19: 19652060-19652210PBX466.63
View top connections.

Other

CodePlot