SOM cluster: 341

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 72
Promoter: 18%
CpG-Island: 9%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/72 | e-val: 1.9e-30
Factore-val(match)DB
SP10.000000093265JASPAR
EWSR1-FLI10.00000054048JASPAR
RREB10.000055716JASPAR
Pax40.00032499JASPAR
PLAG10.0013939JASPAR
Sites: 47/72 | e-val: 0.00000000000011
Factore-val(match)DB
TEAD10.0000000012267JASPAR
FEV0.00021585JASPAR
Stat30.0005735JASPAR
REL0.00098441JASPAR
NF-kappaB0.0013304JASPAR

BED file downloads

Download top of 72 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 8783360-8783510CAV340.57
chr3: 8783360-8783510OXTR40.57
chr17: 48764120-48764270ABCC347.32
chr17: 48764120-48764270LUC7L347.32
chr17: 48764120-48764270ANKRD4047.32
chr11: 68811860-68812010RP11-554A11.652.17
chr12: 119616520-119616670HSPB859.71
chr12: 119616520-119616670RP11-364C11.259.71
chr11: 69451380-69451530CCND160.6
chr6: 37027460-37027610FGD263.89
View top connections.

Other

CodePlot