SOM cluster: 344

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 104
Promoter: 37%
CpG-Island: 26%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.00013
Factore-val(match)DB
SP10.00000053985JASPAR
Egr10.00077166JASPAR
TP530.0011953JASPAR
RREB10.0027061JASPAR
Klf40.0042946JASPAR
Sites: 24/100 | e-val: 2.1
Factore-val(match)DB
AP10.000000000023278JASPAR
NFE2L20.0000000096695JASPAR
Foxa20.0036415JASPAR
PPARG0.0040414JASPAR
NFE2L1::MafG0.0060321JASPAR

BED file downloads

Download top of 104 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 116364460-116364610RP11-168K11.248.24
chr17: 43306480-43306630FMNL152.4
chr17: 43306480-43306630HEXIM152.4
chr17: 43306480-43306630CTD-2020K17.452.4
chr6: 122720400-122720550SERINC156.64
chr17: 78193360-78193510GAA68.73
chr17: 78193360-78193510SLC26A1168.73
chr16: 48400500-48400650LONP274.23
chr3: 5068220-5068370BHLHE4078.54
chr3: 5068220-5068370BHLHE40-AS178.54
View top connections.

Other

CodePlot