SOM cluster: 351

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 226
Promoter: 14%
CpG-Island: 21%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 0
Factore-val(match)DB
SP10.00000000001902JASPAR
PLAG10.000014408JASPAR
Klf40.000016156JASPAR
RREB10.00018215JASPAR
TFAP2A0.00051357JASPAR
Sites: 74/100 | e-val: 0.0000000025
Factore-val(match)DB
RREB10.0000013448JASPAR
SP10.0000065107JASPAR
PLAG10.000026282JASPAR
TFAP2A0.00059452JASPAR
Pax40.0014298JASPAR

BED file downloads

Download top of 226 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 48398285-48398435VDR46.52
chr12: 48398285-48398435COL2A146.52
chr10: 104409645-104409795WBP1L52.36
chr10: 104409645-104409795TRIM852.36
chr10: 104409645-104409795SUFU52.36
chr19: 49244985-49245135FUT154.69
chr11: 64937580-64937730ZFPL164.84
chr11: 64937580-64937730SPDYC64.84
chr17: 15870360-15870510TTC1964.93
chr17: 15870360-15870510ZSWIM764.93
View top connections.

Other

CodePlot