SOM cluster: 36

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 102
Promoter: 4%
CpG-Island: 2%
Conserved: 85%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0
Factore-val(match)DB
REST0JASPAR
TLX1::NFIC0.0025723JASPAR
RXR::RAR_DR50.0038309JASPAR
SOX90.02542JASPAR
Mafb0.033049JASPAR
Sites: 21/100 | e-val: 0.000000000000032
Factore-val(match)DB
REST0.00000000060146JASPAR
REL0.00035671JASPAR
NHLH10.003611JASPAR
Myf0.0050632JASPAR
NF-kappaB0.0079777JASPAR
Sites: 32/100 | e-val: 0.11
Factore-val(match)DB
REST0.00000001823JASPAR
NFE2L20.000080153JASPAR
Mafb0.00048295JASPAR
BRCA10.0034653JASPAR
MYC::MAX0.0078098JASPAR

BED file downloads

Download top of 102 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 10950020-10950170AF131215.433.78
chr8: 10950020-10950170AF131215.333.78
chr8: 10950020-10950170XKR633.78
chr8: 10950020-10950170AF131215.233.78
chr8: 10950020-10950170AF131215.533.78
chr11: 74944800-74944950ARRB150.85
chr6: 39056220-39056370GLP1R62.8
chr20: 61546380-61546530BHLHE2371.34
chr20: 61546380-61546530ARF4P271.34
chr20: 61546380-61546530COL9A371.34
View top connections.

Other

CodePlot