SOM cluster: 368

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 10125
Promoter: 3%
CpG-Island: 1%
Conserved: 15%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 1.3
Factore-val(match)DB
MEF2A0.0000023719JASPAR
HNF1B0.00051576JASPAR
Lhx30.00052593JASPAR
ARID3A0.00065198JASPAR
Foxq10.001554JASPAR

BED file downloads

Download top of 10125 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150896380-150896530FAM63A12.98
chr9: 109094400-109094550RP11-308N19.131.09
chr10: 33383820-33383970ITGB131.57
chr12: 29543000-29543150OVCH1-AS137.85
chr1: 26375325-26375475RNU6-110P41.06
chr9: 134952405-134952555MED2741.71
chrX: 152827605-152827755HAUS741.75
chr15: 101538385-101538535RP11-505E24.244
chr8: 42611305-42611455CHRNA644.63
chr8: 42611305-42611455RNF17044.63
View top connections.

Other

CodePlot