SOM cluster: 387

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 177
Promoter: 24%
CpG-Island: 26%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 1.3e-23
Factore-val(match)DB
SP10.000000000084778JASPAR
Egr10.00048143JASPAR
INSM10.00079568JASPAR
RXR::RAR_DR50.0019504JASPAR
PLAG10.0037321JASPAR
Sites: 21/100 | e-val: 0.54
Factore-val(match)DB
Klf40.0000000000049629JASPAR
SP10.00000000041702JASPAR
Egr10.00063173JASPAR
Zfx0.0019894JASPAR
Tal1::Gata10.0057096JASPAR
Sites: 26/100 | e-val: 0.00027
Factore-val(match)DB
CTCF0JASPAR
INSM10.0000016631JASPAR
MYC::MAX0.00017794JASPAR
Zfp4230.0027841JASPAR
SP10.0033083JASPAR

BED file downloads

Download top of 177 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 38795720-38795870SPINT233.58
chr19: 38795720-38795870C19orf3333.58
chr19: 38795720-38795870YIF1B33.58
chr19: 50980105-50980255FAM71E154.25
chr9: 35733360-35733510RP11-331F9.454.36
chr9: 35733360-35733510RGP154.36
chr9: 35733360-35733510ARHGEF3954.36
chr11: 78426880-78427030TENM456.45
chr3: 183723900-183724050ABCC558.15
chr1: 26857760-26857910RPS6KA161.33
View top connections.

Other

CodePlot