SOM cluster: 39

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 303
Promoter: 61%
CpG-Island: 70%
Conserved: 88%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.0000027485JASPAR
Egr10.0019011JASPAR
TFAP2A0.0022572JASPAR
PLAG10.007374JASPAR
Klf40.019978JASPAR
Sites: 50/100 | e-val: 2.8e-33
Factore-val(match)DB
SP10.00000023464JASPAR
Pax40.0022451JASPAR
PLAG10.0036148JASPAR
RXR::RAR_DR50.0046297JASPAR
Klf40.011088JASPAR
Sites: 47/100 | e-val: 0.000000000014
Factore-val(match)DB
SP10.000015052JASPAR
TFAP2A0.00015555JASPAR
RREB10.0035045JASPAR
Klf40.0090005JASPAR
PLAG10.016486JASPAR

BED file downloads

Download top of 303 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 132515260-132515410PTGES49.06
chr9: 132515260-132515410AL590369.149.06
chr9: 132515260-132515410TOR1B49.06
chr7: 42277120-42277270GLI353.08
chr3: 126074780-126074930RP11-71E19.154.98
chr3: 126074780-126074930KLF1554.98
chr17: 76338120-76338270SOCS355.04
chr17: 76338120-76338270SNORA3055.04
chr17: 76338120-76338270RN7SL236P55.04
chr3: 184286740-184286890EPHB355.1
View top connections.

Other

CodePlot