SOM cluster: 399

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 197
Promoter: 54%
CpG-Island: 67%
Conserved: 80%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.00000014891JASPAR
Klf40.00000099686JASPAR
TFAP2A0.0027131JASPAR
RREB10.0032984JASPAR
Egr10.015465JASPAR
Sites: 89/100 | e-val: 1.2e-35
Factore-val(match)DB
SP10.0000050338JASPAR
TFAP2A0.000039392JASPAR
PLAG10.020016JASPAR
Zfp4230.022104JASPAR
Pax50.031063JASPAR
Sites: 59/100 | e-val: 0.0000026
Factore-val(match)DB
SP10.0000044991JASPAR
Klf40.00009226JASPAR
Zfx0.0015275JASPAR
Egr10.0040323JASPAR
Pax40.031923JASPAR

BED file downloads

Download top of 197 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 40927200-40927350PLD353.94
chr22: 38453260-38453410POLR2F55.89
chr19: 11877760-11877910ZNF44161.25
chr7: 106301680-106301830CTB-111H14.162.69
chr11: 129939200-129939490ST1463.07
chr11: 129939200-129939490TCEB2P263.07
chr19: 13958120-13958270C19orf5766.53
chr19: 13958120-13958270CCDC13066.53
chr19: 13958120-13958270C19orf5366.53
chr6: 27782560-27782710HIST1H2BN68.1
View top connections.

Other

CodePlot