SOM cluster: 40

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 75
Promoter: 43%
CpG-Island: 53%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 64/75 | e-val: 1.8e-40
Factore-val(match)DB
SP10.0000000020935JASPAR
Klf40.000014901JASPAR
Egr10.00016195JASPAR
Zfx0.0025786JASPAR
TFAP2A0.0032419JASPAR
Sites: 68/75 | e-val: 0.054
Factore-val(match)DB
Egr10.00015154JASPAR
SP10.00025741JASPAR
TFAP2A0.0021874JASPAR
Klf40.0071067JASPAR
INSM10.065386JASPAR

BED file downloads

Download top of 75 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151103780-151103930TMOD414.33
chr1: 151103780-151103930PRUNE14.33
chr17: 48585760-48585910MYCBPAP55.73
chr17: 48585760-48585910EPN355.73
chr8: 98290160-98290310TSPYL556.91
chr18: 47824380-47824530CCDC1157.52
chr9: 112810800-112810950AKAP257.61
chr12: 121974160-121974310RNU6-1004P63.12
chr11: 125366160-125366310EI2465.72
chr11: 125366160-125366310FEZ165.72
View top connections.

Other

CodePlot