SOM cluster: 400

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 199
Promoter: 6%
CpG-Island: 0%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 0
Factore-val(match)DB
AP10.000000000017336JASPAR
NFE2L20.000000007174JASPAR
PPARG0.0029234JASPAR
NFE2L1::MafG0.0053984JASPAR
Foxa20.015619JASPAR
Sites: 23/100 | e-val: 0.0000021
Factore-val(match)DB
FEV0.000000090965JASPAR
SPI10.00000701JASPAR
SPIB0.0000079501JASPAR
ELF50.000057373JASPAR
ELK40.002734JASPAR

BED file downloads

Download top of 199 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 109128220-109128370SSH130.63
chr12: 109128220-109128370CORO1C30.63
chr12: 109128220-109128370RP11-689B22.230.63
chr1: 209822780-209822930G0S238.47
chr17: 76858480-76858630CYTH139.3
chr17: 76858480-76858630DDC839.3
chr17: 76858480-76858630TIMP239.3
chr8: 38385680-38385830FGFR150.65
chr8: 38385680-38385830RP11-675F6.450.65
chr8: 38385680-38385830C8orf8650.65
View top connections.

Other

CodePlot