SOM cluster: 403

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 224
Promoter: 17%
CpG-Island: 60%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.000019568JASPAR
PLAG10.0091172JASPAR
TFAP2A0.011504JASPAR
SPIB0.014078JASPAR
Klf40.019272JASPAR
Sites: 92/100 | e-val: 8.4e-30
Factore-val(match)DB
SP10.000058838JASPAR
EWSR1-FLI10.0047624JASPAR
Pax40.012681JASPAR
PLAG10.01308JASPAR
TFAP2A0.028289JASPAR

BED file downloads

Download top of 224 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 8594325-8594475CPZ38.49
chr4: 8594325-8594475GPR7838.49
chr9: 72658825-72658975MAMDC251.93
chr1: 46669240-46669390RP11-322N21.258.55
chr1: 46669240-46669390TSPAN158.55
chr1: 46669240-46669390LURAP158.55
chr1: 46669240-46669390RP4-533D7.558.55
chr2: 160918905-160919055PLA2R159.51
chr4: 174439040-174439190HAND259.82
chr18: 56531600-56531750ZNF53263.68
View top connections.

Other

CodePlot