SOM cluster: 415

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 216
Promoter: 3%
CpG-Island: 0%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.0000000000011
Factore-val(match)DB
AP10.00000000046992JASPAR
NFE2L20.0000000028594JASPAR
NFE2L1::MafG0.00019986JASPAR
PBX10.0053412JASPAR
Pax60.016689JASPAR
Sites: 37/100 | e-val: 0.36
Factore-val(match)DB
RUNX10.0000000088667JASPAR
RREB10.0011031JASPAR
ZNF354C0.0039476JASPAR
MYC::MAX0.014454JASPAR
SRY0.0173JASPAR

BED file downloads

Download top of 216 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 140908680-140908830PCDHGB253.22
chr5: 140908680-140908830PCDHGB653.22
chr5: 140908680-140908830DIAPH153.22
chr5: 140908680-140908830PCDHGA353.22
chr5: 140908680-140908830PCDHGA853.22
chr5: 140908680-140908830RN7SL68P53.22
chr5: 140908680-140908830PCDHGB453.22
chr5: 140908680-140908830PCDHGA553.22
chr5: 140908680-140908830PCDHGA153.22
chr5: 140908680-140908830PCDHGA1053.22
View top connections.

Other

CodePlot