SOM cluster: 419

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 383
Promoter: 22%
CpG-Island: 90%
Conserved: 61%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 98/100 | e-val: 0
Factore-val(match)DB
SP10.000000027429JASPAR
TFAP2A0.00027244JASPAR
Klf40.0017778JASPAR
Egr10.0020485JASPAR
Pax50.0025382JASPAR
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.000000010027JASPAR
TFAP2A0.0000037814JASPAR
PLAG10.0000045354JASPAR
Klf40.0048143JASPAR
Egr10.01846JASPAR
Sites: 53/100 | e-val: 0.000000000000041
Factore-val(match)DB
TFAP2A0.00012176JASPAR
PLAG10.0017336JASPAR
SP10.0026208JASPAR
Klf40.011764JASPAR
Zfx0.05583JASPAR

BED file downloads

Download top of 383 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150946700-150946850CERS218.06
chr1: 150946700-150946850C1orf5618.06
chr12: 108909220-108909370SART338.24
chr12: 108909220-108909370TMEM11938.24
chr10: 99186220-99186370AL355490.147.42
chr2: 73511140-73511290CCT748.93
chr2: 73511140-73511290NOTO48.93
chr17: 38278985-38279135NR1D150.81
chr17: 38278985-38279135MED2450.81
chr17: 38278985-38279135THRA50.81
View top connections.

Other

CodePlot