SOM cluster: 420

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 285
Promoter: 33%
CpG-Island: 83%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 98/100 | e-val: 0
Factore-val(match)DB
SP10.0000037805JASPAR
TFAP2A0.00082319JASPAR
RREB10.0019821JASPAR
PLAG10.0056116JASPAR
Klf40.0070986JASPAR

BED file downloads

Download top of 285 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 182758545-182758695RP11-317P15.341.39
chr9: 132597300-132597450UBE2V1P445.41
chr9: 132597300-132597450FNBP145.41
chr19: 48836665-48836815TMEM14347.75
chr19: 48836665-48836815KDELR147.75
chr19: 48836665-48836815CARD847.75
chr1: 11333665-11333815UBIAD151.83
chr11: 67159025-67159175PPP1CA52.42
chr11: 67159025-67159175RPS6KB252.42
chr11: 67159025-67159175RAD9A52.42
View top connections.

Other

CodePlot