SOM cluster: 423

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 129
Promoter: 10%
CpG-Island: 6%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 0.000000023
Factore-val(match)DB
SPI10.0000000031777JASPAR
SPIB0.000000051476JASPAR
FEV0.000006092JASPAR
ELF50.000022124JASPAR
IRF10.00004524JASPAR

BED file downloads

Download top of 129 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 176906400-176906550FAM193B39.38
chr13: 41627640-41627790KBTBD656.05
chr13: 41627640-41627790ELF156.05
chr10: 45463680-45463830RASSF457.66
chr2: 65459280-65459430ACTR258.46
chr5: 65141260-65141410NLN63.59
chr4: 40553280-40553430RP11-588L15.167.67
chr21: 40203320-40203470AP001042.169.19
chr8: 121881060-121881210SNTB174.99
chr17: 33814540-33814690SLFN1278.72
View top connections.

Other

CodePlot