SOM cluster: 43

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 149
Promoter: 50%
CpG-Island: 77%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.0000000049217JASPAR
PLAG10.000099365JASPAR
TFAP2A0.00021781JASPAR
Klf40.00026097JASPAR
RREB10.00051311JASPAR
Sites: 62/100 | e-val: 8.7e-31
Factore-val(match)DB
EWSR1-FLI10.00000043503JASPAR
SP10.000034325JASPAR
PLAG10.016148JASPAR
TFAP2A0.017586JASPAR
Klf40.04453JASPAR
Sites: 55/100 | e-val: 0.19
Factore-val(match)DB
SP10.00000010643JASPAR
TFAP2A0.00000016615JASPAR
Klf40.000002659JASPAR
RREB10.000068659JASPAR
Egr10.0015417JASPAR

BED file downloads

Download top of 149 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 117160180-117160330RP11-9M16.240.67
chr9: 117160180-117160330AKNA40.67
chr17: 72209440-72209590TTYH247.92
chr10: 91404980-91405130RP11-80H5.749.23
chr16: 89984320-89984470TCF2551.96
chr16: 89984320-89984470AFG3L1P51.96
chr16: 89984320-89984470DBNDD151.96
chr11: 64949200-64949350TMEM26252.33
chr2: 97534400-97534550CNNM453.21
chr2: 97534400-97534550ANKRD3953.21
View top connections.

Other

CodePlot