SOM cluster: 432

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 239
Promoter: 6%
CpG-Island: 11%
Conserved: 31%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 31/100 | e-val: 0.0000018
Factore-val(match)DB
SP10.0000000000026882JASPAR
Pax40.000089981JASPAR
Egr10.00045164JASPAR
Klf40.00058506JASPAR
EWSR1-FLI10.0025344JASPAR
Sites: 44/100 | e-val: 0.13
Factore-val(match)DB
SPI10.000088289JASPAR
EWSR1-FLI10.00028472JASPAR
SP10.00087309JASPAR
znf1430.0018916JASPAR
CTCF0.0059235JASPAR
Sites: 24/100 | e-val: 0.01
Factore-val(match)DB
Egr10.0035281JASPAR
INSM10.0052225JASPAR
Klf40.013879JASPAR
TFAP2A0.015074JASPAR
SP10.016209JASPAR

BED file downloads

Download top of 239 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 100636005-100636155ZIC545.52
chr13: 100636005-100636155ZIC245.52
chr3: 142700080-142700230U2SURP52.65
chr13: 114995720-114995870CLCP262.86
chr10: 95326300-95326450FFAR463.24
chr16: 71559985-71560135CHST464.54
chrX: 67906020-67906170STARD865.68
chr6: 111187600-111187750AMD166.75
chr16: 50754080-50754230NKD168.39
chr15: 91199405-91199555CRTC369.32
View top connections.

Other

CodePlot