SOM cluster: 448

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 121
Promoter: 27%
CpG-Island: 28%
Conserved: 83%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 93/100 | e-val: 0
Factore-val(match)DB
Pax40.000000010212JASPAR
SP10.0000005091JASPAR
RREB10.000025516JASPAR
PLAG10.0017189JASPAR
Tal1::Gata10.0020689JASPAR
Sites: 47/100 | e-val: 0.000000000000017
Factore-val(match)DB
Klf40.00025123JASPAR
RREB10.00027194JASPAR
SP10.00066759JASPAR
Myb0.0006839JASPAR
Egr10.00070373JASPAR
Sites: 56/100 | e-val: 0.0000092
Factore-val(match)DB
SP10.0000612JASPAR
PLAG10.0022198JASPAR
RXR::RAR_DR50.017241JASPAR
REST0.023362JASPAR
SPI10.032683JASPAR

BED file downloads

Download top of 121 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 183894400-183894550DVL339.44
chr3: 183894400-183894550AP2M139.44
chr3: 183894400-183894550EIF2B539.44
chr3: 183894400-183894550CAMK2N239.44
chr3: 183894400-183894550ECE239.44
chr1: 145092540-145092690PDE4DIP57.8
chr1: 145092540-145092690SEC22B57.8
chr19: 9957780-9957930PIN160.87
chr19: 41829520-41829670CCDC9764.12
chr19: 41829520-41829670CTC-435M10.364.12
View top connections.

Other

CodePlot