SOM cluster: 450

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 164
Promoter: 16%
CpG-Island: 5%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0
Factore-val(match)DB
NFE2L20.00000000011014JASPAR
AP10.0000000079841JASPAR
NFE2L1::MafG0.0068913JASPAR
Pax20.0082481JASPAR
Pax60.020999JASPAR
Sites: 40/100 | e-val: 0.0000000012
Factore-val(match)DB
NFE2L20.00000000016815JASPAR
AP10.000000023106JASPAR
Mafb0.0046423JASPAR
PPARG0.0080669JASPAR
NFE2L1::MafG0.039547JASPAR
Sites: 29/100 | e-val: 0.000018
Factore-val(match)DB
EWSR1-FLI10.000000026648JASPAR
SP10.000035866JASPAR
PLAG10.0023628JASPAR
Tal1::Gata10.0031047JASPAR
Pax40.0053627JASPAR

BED file downloads

Download top of 164 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 130727920-130728070PIP5KL147.78
chr1: 151284180-151284330RFX552.6
chr1: 151284180-151284330RP11-126K1.852.6
chr1: 151284180-151284330SELENBP152.6
chr1: 151284180-151284330RP11-126K1.652.6
chr1: 151284180-151284330POGZ52.6
chr1: 151284180-151284330ZNF68752.6
chr1: 151284180-151284330PSMD452.6
chr12: 10874800-10874950YBX353.65
chr8: 102171240-102171390KB-1460A1.155.24
View top connections.

Other

CodePlot