SOM cluster: 452

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 319
Promoter: 45%
CpG-Island: 87%
Conserved: 86%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 91/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.000004745JASPAR
SP10.000057917JASPAR
Egr10.0068151JASPAR
INSM10.030874JASPAR
PLAG10.034931JASPAR
Sites: 76/100 | e-val: 5.70048e-42
Factore-val(match)DB
SP10.000000014469JASPAR
PLAG10.00084002JASPAR
TFAP2A0.0039732JASPAR
Egr10.0046067JASPAR
INSM10.025943JASPAR
Sites: 47/100 | e-val: 0.094
Factore-val(match)DB
PLAG10.0000081196JASPAR
SP10.000050176JASPAR
TFAP2A0.00019085JASPAR
Klf40.010847JASPAR
Egr10.021103JASPAR

BED file downloads

Download top of 319 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151118885-151119035GABPB221.19
chr1: 151118885-151119035TMOD421.19
chr8: 81785540-81785690HMGB1P4144.09
chr8: 81785540-81785690ZNF70444.09
chr9: 34628905-34629055RP11-195F19.551.44
chr16: 2039945-2040095GFER54.32
chr16: 2039945-2040095NDUFB1054.32
chr16: 2039945-2040095NTHL154.32
chr2: 165477900-165478050GRB1455.48
chr17: 7185080-7185230KCTD1156.17
View top connections.

Other

CodePlot