SOM cluster: 455

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 141
Promoter: 22%
CpG-Island: 13%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 2.6e-26
Factore-val(match)DB
ZEB10.000081085JASPAR
T0.00045058JASPAR
Arnt0.00084169JASPAR
MAX0.0010532JASPAR
USF10.0028936JASPAR
Sites: 55/100 | e-val: 3.2e-29
Factore-val(match)DB
SP10.0000000000007494JASPAR
RREB10.000013873JASPAR
Klf40.000035043JASPAR
Egr10.0033088JASPAR
Pax40.0034447JASPAR
Sites: 23/100 | e-val: 0.0000087
Factore-val(match)DB
Tcfcp2l10.00046348JASPAR
RREB10.00088045JASPAR
Klf40.0058281JASPAR
IRF10.011983JASPAR
NFIC0.012523JASPAR

BED file downloads

Download top of 141 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 102506140-102506290GRHL240.64
chr1: 151485680-151485830TUFT141.44
chr1: 151485680-151485830CGN41.44
chr2: 31030300-31030450CAPN1343.96
chr17: 18153680-18153830SHMT144.91
chr19: 10697940-10698090AP1M254.3
chr16: 2908120-2908270ZG16B54.66
chr16: 2908120-2908270PRSS2254.66
chr16: 84875500-84875650USP1056.93
chr8: 95651660-95651810ESRP162.35
View top connections.

Other

CodePlot