SOM cluster: 456

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 175
Promoter: 13%
CpG-Island: 10%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 7.1e-18
Factore-val(match)DB
EWSR1-FLI10.0000059306JASPAR
RREB10.000021453JASPAR
SP10.000038872JASPAR
Pax40.0013629JASPAR
Egr10.014939JASPAR
Sites: 34/100 | e-val: 0.0000088
Factore-val(match)DB
SP10.000000000075556JASPAR
Klf40.0000001446JASPAR
Tal1::Gata10.00010786JASPAR
MZF1_1-40.0013263JASPAR
Pax40.0036232JASPAR
Sites: 26/100 | e-val: 1.9
Factore-val(match)DB
REST0.00056862JASPAR
Myf0.0062347JASPAR
SP10.01156JASPAR
Pax40.013723JASPAR
RREB10.032012JASPAR

BED file downloads

Download top of 175 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 203018005-203018155RP11-335O13.846.54
chr17: 48058160-48058310RP11-1094H24.450.95
chr17: 48058325-48058475RP11-1094H24.351.49
chr19: 51504320-51504470KLK1459.52
chr19: 51504320-51504470CTU159.52
chr19: 51504320-51504470KLK1359.52
chr16: 87520985-87521135ZCCHC1464.77
chr12: 53892540-53892690RP11-793H13.364.96
chr19: 46524825-46524975IGFL466.86
chr1: 33226480-33226630KIAA152268.89
View top connections.

Other

CodePlot