SOM cluster: 465

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 301
Promoter: 37%
CpG-Island: 71%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 83/100 | e-val: 2.7e-30
Factore-val(match)DB
SP10.0000037753JASPAR
TFAP2A0.000331JASPAR
Klf40.00044281JASPAR
PLAG10.001464JASPAR
Egr10.028285JASPAR
Sites: 56/100 | e-val: 0.0011
Factore-val(match)DB
TFAP2A0.00000012931JASPAR
SP10.0000067998JASPAR
PLAG10.0080607JASPAR
Zfx0.018716JASPAR
Pax50.020884JASPAR

BED file downloads

Download top of 301 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 147142325-147142475RN7SL261P32.98
chr7: 44888220-44888370H2AFV47.45
chr7: 44888220-44888370ZMIZ247.45
chr7: 44888220-44888370PPIA47.45
chr16: 3200180-3200330ZNF20552.74
chr3: 183873805-183873955EIF2B553.33
chr19: 10044785-10044935COL5A354.83
chr17: 49197425-49197575MBTD155.79
chr17: 49197425-49197575NME155.79
chr17: 49197425-49197575NME1-NME255.79
View top connections.

Other

CodePlot